PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_14820
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 341aa    MW: 38896.3 Da    PI: 4.6918
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_14820genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.45.7e-21116165255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+G+r+++ +g+W+AeIrdp++     r++lg+f+t+eeAa+a++aa++k +g
  PEQU_14820 116 QYRGIRQRP-WGKWAAEIRDPRK---GERVWLGTFDTPEEAARAYDAAARKVRG 165
                 69*******.**********954...3************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103224.816116173IPR001471AP2/ERF domain
CDDcd000183.36E-23116174No hitNo description
SMARTSM003805.6E-37116179IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.1E-33116175IPR001471AP2/ERF domain
SuperFamilySSF541712.22E-23116175IPR016177DNA-binding domain
PRINTSPR003671.4E-11117128IPR001471AP2/ERF domain
PfamPF008474.9E-14117165IPR001471AP2/ERF domain
PRINTSPR003671.4E-11139155IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    Send to blast
MCGGAIISDF IPSARQRRVA KDCLWADQGK KKKKKRNDGR KIRAEEFDDD FEADFQEFKD  60
EVTEVDEMEE PFDVKSFAFR PKLAPLSRAE DSTILKRFQL DGDADHKSGK RKRKNQYRGI  120
RQRPWGKWAA EIRDPRKGER VWLGTFDTPE EAARAYDAAA RKVRGKKAKV NFPDEAPKTA  180
LSHPPQTLQE NSNWESSFDA NYNFYSSFCM GEEIVVPIKI QNMYSEQESN SLNCSDYGWE  240
HEFNNPEINS IPSTTVDELK SAYLEESAAG KKLKTDSGED SAMKFSEDLS AFDPVLKFMT  300
SSEGTLDGSL DSILGTEMIQ DGINFMDLWS FEDIPISDMI F
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A6e-21116173260ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12935KKKKKKR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010917392.11e-100PREDICTED: ethylene-responsive transcription factor 1-like
TrEMBLI7EXJ58e-88I7EXJ5_MUSAC; ERF3
STRINGPGSC0003DMT4000236092e-80(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP103938134
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G14230.23e-41related to AP2 2